MDANCE Logo

About

  • MDANCE: Molecular Dynamics Analysis with N-ary Clustering Ensembles
  • Getting Started

Examples

  • Learn NANI in 60 seconds!
  • Preprocessing of Molecular Dynamics Data
  • Cluster Analysis
  • Clustering Results Postprocessing

MDANCE's Tutorials

  • k-means NANI Tutorial
  • eQual - Extended Quality Clustering
  • PRIME Tutorial
  • SHINE tutorial
  • HELM - Hierarchical Extended Linkage Method

MDANCE's API

  • mdance.cluster
  • mdance.cli
  • mdance.data
  • mdance.inputs
  • mdance.outputs
  • mdance.prime
  • mdance.tools
MDANCE
  • Overview: module code

All modules for which code is available

  • mdance.cli.prime_rep
  • mdance.cli.prime_sim
  • mdance.cluster.equal
  • mdance.cluster.helm
  • mdance.cluster.nani
  • mdance.cluster.shine
  • mdance.inputs.preprocess
  • mdance.outputs.postprocess
  • mdance.prime.rep_frames
  • mdance.prime.sim_calc
  • mdance.tools.bts
  • mdance.tools.esim
  • mdance.tools.isim

© Copyright 2024, Lexin Chen and Ramón Alain Miranda Quintana.

Built with Sphinx using a theme provided by Read the Docs.